Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Usp42B2RQC2 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp42B2RQC2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp42B2RQC2 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp42B2RQC2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp42B2RQC2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp42B2RQC2 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.05□□□□□ -0.16
Usp42B2RQC2 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp42B2RQC2 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp42B2RQC2 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp42B2RQC2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Gm43773-201ENSMUST00000198548 2162 ntBASIC14.04□□□□□ -0.16
Usp42B2RQC2 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Gm15236-201ENSMUST00000117309 379 ntBASIC14.04□□□□□ -0.16
Usp42B2RQC2 Gm11439-201ENSMUST00000118598 409 ntBASIC14.04□□□□□ -0.16
Usp42B2RQC2 Gm11660-201ENSMUST00000120955 412 ntBASIC14.04□□□□□ -0.16
Usp42B2RQC2 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Gm43184-201ENSMUST00000197247 542 ntBASIC14.04□□□□□ -0.16
Usp42B2RQC2 Gm18056-201ENSMUST00000207670 568 ntBASIC14.04□□□□□ -0.16
Usp42B2RQC2 Gm18061-201ENSMUST00000208350 562 ntBASIC14.04□□□□□ -0.16
Usp42B2RQC2 Gm18063-201ENSMUST00000208529 568 ntBASIC14.04□□□□□ -0.16
Usp42B2RQC2 Gm18052-201ENSMUST00000208750 559 ntBASIC14.04□□□□□ -0.16
Usp42B2RQC2 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.04□□□□□ -0.16
Usp42B2RQC2 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.04□□□□□ -0.16
Usp42B2RQC2 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp42B2RQC2 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Gm43174-201ENSMUST00000195914 2445 ntBASIC14.03□□□□□ -0.16
Usp42B2RQC2 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Gm6114-201ENSMUST00000182472 968 ntBASIC14.03□□□□□ -0.16
Usp42B2RQC2 Gm27530-201ENSMUST00000184096 98 ntBASIC14.03□□□□□ -0.16
Usp42B2RQC2 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Gm9797-202ENSMUST00000218003 294 ntBASIC14.03□□□□□ -0.16
Usp42B2RQC2 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp42B2RQC2 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Usp42B2RQC2 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usp42B2RQC2 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp42B2RQC2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp42B2RQC2 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp42B2RQC2 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp42B2RQC2 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp42B2RQC2 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Usp42B2RQC2 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp42B2RQC2 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.02□□□□□ -0.16
Usp42B2RQC2 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp42B2RQC2 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp42B2RQC2 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Usp42B2RQC2 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Usp42B2RQC2 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms