Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Gm22144-201ENSMUST00000157402 102 ntBASIC12.55□□□□□ -0.4
Scn1aA2APX8 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Scn1aA2APX8 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.55□□□□□ -0.4
Scn1aA2APX8 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1aA2APX8 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.55□□□□□ -0.4
Scn1aA2APX8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1aA2APX8 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.55□□□□□ -0.4
Scn1aA2APX8 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.55□□□□□ -0.4
Scn1aA2APX8 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.55□□□□□ -0.4
Scn1aA2APX8 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.55□□□□□ -0.4
Scn1aA2APX8 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn1aA2APX8 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Gm12419-201ENSMUST00000116649 636 ntBASIC12.54□□□□□ -0.4
Scn1aA2APX8 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Scn1aA2APX8 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1aA2APX8 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.54□□□□□ -0.4
Scn1aA2APX8 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1aA2APX8 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Gm28937-201ENSMUST00000185413 695 ntBASIC12.54□□□□□ -0.4
Scn1aA2APX8 Gm29400-201ENSMUST00000187208 695 ntBASIC12.54□□□□□ -0.4
Scn1aA2APX8 Gm28662-201ENSMUST00000188446 695 ntBASIC12.54□□□□□ -0.4
Scn1aA2APX8 Gm28251-201ENSMUST00000188835 695 ntBASIC12.54□□□□□ -0.4
Scn1aA2APX8 Gm37318-201ENSMUST00000194325 695 ntBASIC12.54□□□□□ -0.4
Scn1aA2APX8 Gm38017-201ENSMUST00000194768 695 ntBASIC12.54□□□□□ -0.4
Scn1aA2APX8 Gm37287-201ENSMUST00000195449 695 ntBASIC12.54□□□□□ -0.4
Scn1aA2APX8 Gm37793-201ENSMUST00000195548 695 ntBASIC12.54□□□□□ -0.4
Scn1aA2APX8 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.54□□□□□ -0.4
Scn1aA2APX8 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.54□□□□□ -0.4
Scn1aA2APX8 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.54□□□□□ -0.4
Scn1aA2APX8 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Scn1aA2APX8 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.53□□□□□ -0.4
Scn1aA2APX8 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1aA2APX8 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms