Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm7986-201ENSMUST00000221336 551 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Gm42467-201ENSMUST00000202954 1447 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Metap2-210ENSMUST00000181217 1984 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Gm42651-201ENSMUST00000199851 1339 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Gm7424-201ENSMUST00000206919 902 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 CT030035.1-201ENSMUST00000223964 935 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 AC162940.1-201ENSMUST00000224745 1167 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 AC093022.5-201ENSMUST00000226841 1079 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC6.16□□□□□ -1.42
Ubr4A2AN08 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ubr4A2AN08 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Gm12047-201ENSMUST00000117561 944 ntBASIC6.15□□□□□ -1.42
Ubr4A2AN08 Gm15532-201ENSMUST00000121192 884 ntBASIC6.15□□□□□ -1.42
Ubr4A2AN08 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Mir8114-201ENSMUST00000183582 111 ntBASIC6.15□□□□□ -1.42
Ubr4A2AN08 Gm38258-201ENSMUST00000191792 675 ntTSL 3 BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Gm38151-201ENSMUST00000195085 289 ntBASIC6.15□□□□□ -1.42
Ubr4A2AN08 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC6.15□□□□□ -1.42
Ubr4A2AN08 AC122035.1-201ENSMUST00000227576 1016 ntBASIC6.15□□□□□ -1.42
Ubr4A2AN08 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 AC159649.2-201ENSMUST00000222984 3223 ntBASIC6.15□□□□□ -1.42
Ubr4A2AN08 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC6.15□□□□□ -1.42
Ubr4A2AN08 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC6.15□□□□□ -1.42
Ubr4A2AN08 BC025920-204ENSMUST00000121138 1611 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Gm15476-201ENSMUST00000118247 1191 ntBASIC6.15□□□□□ -1.42
Ubr4A2AN08 Gm6939-201ENSMUST00000122029 864 ntBASIC6.15□□□□□ -1.42
Ubr4A2AN08 Gm15347-201ENSMUST00000145372 385 ntTSL 3 BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Gm23220-201ENSMUST00000158115 137 ntBASIC6.15□□□□□ -1.42
Ubr4A2AN08 Gm4982-201ENSMUST00000160440 1098 ntBASIC6.15□□□□□ -1.42
Ubr4A2AN08 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Klk4-201ENSMUST00000007161 1249 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC6.15□□□□□ -1.42
Ubr4A2AN08 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Gm42863-201ENSMUST00000197875 2958 ntBASIC6.15□□□□□ -1.42
Ubr4A2AN08 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Gm24597-201ENSMUST00000122503 300 ntBASIC6.15□□□□□ -1.42
Ubr4A2AN08 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC6.15□□□□□ -1.42
Ubr4A2AN08 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ubr4A2AN08 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC6.15□□□□□ -1.42
Ubr4A2AN08 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms