Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.72□□□□□ -0.53
Gm28729A0A1B0GSW2 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm28729A0A1B0GSW2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.72□□□□□ -0.53
Gm28729A0A1B0GSW2 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
Gm28729A0A1B0GSW2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm28729A0A1B0GSW2 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Gm8194-201ENSMUST00000159783 859 ntBASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Mir7076-201ENSMUST00000183519 74 ntBASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm28729A0A1B0GSW2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Gm28729A0A1B0GSW2 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.71□□□□□ -0.54
Gm28729A0A1B0GSW2 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Gm28729A0A1B0GSW2 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm28729A0A1B0GSW2 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.71□□□□□ -0.54
Gm28729A0A1B0GSW2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.71□□□□□ -0.54
Gm28729A0A1B0GSW2 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm28729A0A1B0GSW2 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm28729A0A1B0GSW2 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm28729A0A1B0GSW2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Rubie-203ENSMUST00000227803 2430 ntBASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm28388-201ENSMUST00000186262 437 ntBASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm38210-201ENSMUST00000191944 809 ntBASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm9645-201ENSMUST00000197131 792 ntBASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm2553-201ENSMUST00000215986 605 ntBASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Gm28729A0A1B0GSW2 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm28729A0A1B0GSW2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm28729A0A1B0GSW2 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm28729A0A1B0GSW2 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm28729A0A1B0GSW2 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm28729A0A1B0GSW2 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms