Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Gm11425-201ENSMUST00000119608 498 ntBASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Gm4034-201ENSMUST00000187674 480 ntBASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Gm44958-201ENSMUST00000203734 736 ntBASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Gm9396-201ENSMUST00000076703 567 ntBASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Gm13829-201ENSMUST00000119600 138 ntBASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Gm13342-201ENSMUST00000121055 207 ntBASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Gm24548-201ENSMUST00000158650 108 ntBASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Gm27023-201ENSMUST00000182372 285 ntBASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Gm37008-201ENSMUST00000195712 319 ntBASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Gm18187-201ENSMUST00000196476 984 ntBASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Gm42599-201ENSMUST00000201308 469 ntBASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5-4A0A075B652 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms