Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Gm23119-201ENSMUST00000158610 140 ntBASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Gm27702-201ENSMUST00000184512 56 ntBASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Gm44775-201ENSMUST00000207266 1456 ntBASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav7n-4A0A075B620 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Gm13223-201ENSMUST00000118609 747 ntBASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Gm9083-201ENSMUST00000120423 819 ntBASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Gm9136-201ENSMUST00000193368 454 ntBASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Gm37042-201ENSMUST00000193816 581 ntBASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Gm6007-201ENSMUST00000208170 823 ntBASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Gm18473-201ENSMUST00000220543 868 ntBASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Gm37613-201ENSMUST00000195677 3580 ntBASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Trav7n-4A0A075B620 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav7n-4A0A075B620 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav7n-4A0A075B620 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
Trav7n-4A0A075B620 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav7n-4A0A075B620 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
Trav7n-4A0A075B620 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Trav7n-4A0A075B620 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.06□□□□□ -0.96
Trav7n-4A0A075B620 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trav7n-4A0A075B620 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav7n-4A0A075B620 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav7n-4A0A075B620 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms