Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.37□□□□□ -0.59
Trim3Q9R1R2 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Gm27023-201ENSMUST00000182372 285 ntBASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Gm31256-201ENSMUST00000194705 506 ntBASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim3Q9R1R2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim3Q9R1R2 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms