Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ldb3Q9JKS4 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ldb3Q9JKS4 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ldb3Q9JKS4 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ldb3Q9JKS4 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.92□□□□□ -0.66
Ldb3Q9JKS4 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ldb3Q9JKS4 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
Ldb3Q9JKS4 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ldb3Q9JKS4 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ldb3Q9JKS4 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ldb3Q9JKS4 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Ldb3Q9JKS4 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ldb3Q9JKS4 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.92□□□□□ -0.66
Ldb3Q9JKS4 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.92□□□□□ -0.66
Ldb3Q9JKS4 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ldb3Q9JKS4 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ldb3Q9JKS4 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.92□□□□□ -0.66
Ldb3Q9JKS4 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Gm11511-201ENSMUST00000118146 540 ntBASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Gm4857-201ENSMUST00000192718 785 ntBASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Gm37666-201ENSMUST00000194110 866 ntBASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.91□□□□□ -0.66
Ldb3Q9JKS4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Mir877-201ENSMUST00000104738 85 ntBASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Gm8956-201ENSMUST00000203939 825 ntBASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Gm9257-201ENSMUST00000221254 232 ntBASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Ldb3Q9JKS4 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms