Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3a3Q9D554 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Gm12341-201ENSMUST00000119724 503 ntBASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Gm13123-201ENSMUST00000122173 492 ntBASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Gm6152-201ENSMUST00000151704 340 ntBASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Gm27702-201ENSMUST00000184512 56 ntBASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Gm4034-201ENSMUST00000187674 480 ntBASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Gm44882-201ENSMUST00000205702 802 ntBASIC12.15□□□□□ -0.46
Sf3a3Q9D554 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.15□□□□□ -0.46
Sf3a3Q9D554 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3a3Q9D554 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sf3a3Q9D554 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Sf3a3Q9D554 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sf3a3Q9D554 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sf3a3Q9D554 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.14□□□□□ -0.47
Sf3a3Q9D554 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Rmrp-201ENSMUST00000157463 271 ntBASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Gm18307-201ENSMUST00000206864 949 ntBASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3a3Q9D554 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms