Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Gm13123-201ENSMUST00000122173 492 ntBASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Mir6977-201ENSMUST00000184960 64 ntBASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim42Q9D2H5 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Gm16479-201ENSMUST00000121706 932 ntBASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Gm37922-201ENSMUST00000195596 455 ntBASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 AC121870.2-201ENSMUST00000214343 1870 ntBASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim42Q9D2H5 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms