Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Map1b-203ENSMUST00000223725 2669 ntBASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.59□□□□□ -0.55
Khdc3Q9CWU5 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Khdc3Q9CWU5 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Khdc3Q9CWU5 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Gm23912-201ENSMUST00000104687 87 ntBASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Gm9996-201ENSMUST00000070359 913 ntBASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Khdc3Q9CWU5 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Khdc3Q9CWU5 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.57□□□□□ -0.56
Khdc3Q9CWU5 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Khdc3Q9CWU5 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Khdc3Q9CWU5 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Khdc3Q9CWU5 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Khdc3Q9CWU5 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Khdc3Q9CWU5 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.57□□□□□ -0.56
Khdc3Q9CWU5 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Khdc3Q9CWU5 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Khdc3Q9CWU5 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Khdc3Q9CWU5 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Khdc3Q9CWU5 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Khdc3Q9CWU5 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Khdc3Q9CWU5 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Khdc3Q9CWU5 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Khdc3Q9CWU5 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Khdc3Q9CWU5 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Khdc3Q9CWU5 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Khdc3Q9CWU5 Gm11222-201ENSMUST00000119005 738 ntBASIC11.57□□□□□ -0.56
Khdc3Q9CWU5 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Khdc3Q9CWU5 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms