Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Gm14704-201ENSMUST00000120300 874 ntBASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Gm8099-201ENSMUST00000200510 742 ntBASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Gm44771-201ENSMUST00000206975 626 ntBASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 AC159621.2-201ENSMUST00000223519 1326 ntBASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
RTRAFQ9CQE8 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
RTRAFQ9CQE8 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC9.77□□□□□ -0.84
RTRAFQ9CQE8 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
RTRAFQ9CQE8 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
RTRAFQ9CQE8 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
RTRAFQ9CQE8 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
RTRAFQ9CQE8 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
RTRAFQ9CQE8 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Gm14701-201ENSMUST00000117156 348 ntBASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Gm15703-201ENSMUST00000120250 880 ntBASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Gm28760-201ENSMUST00000185995 736 ntBASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
RTRAFQ9CQE8 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTRAFQ9CQE8 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms