Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Gm15198-201ENSMUST00000117283 177 ntBASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Gm12058-201ENSMUST00000118614 437 ntBASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Gm13875-201ENSMUST00000120162 282 ntBASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Gm27501-201ENSMUST00000183599 107 ntBASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Gm15370-201ENSMUST00000117158 253 ntBASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Gm12314-201ENSMUST00000118104 538 ntBASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Gm9083-201ENSMUST00000120423 819 ntBASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Gm43822-201ENSMUST00000200285 476 ntBASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Gm39404-201ENSMUST00000216350 313 ntBASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp1b1Q99LU0 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 Rgr-203ENSMUST00000225070 4704 ntBASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 Gm27516-201ENSMUST00000184237 98 ntBASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 Gm44958-201ENSMUST00000203734 736 ntBASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 Olfr284-202ENSMUST00000206647 966 ntBASIC11.41□□□□□ -0.58
Chmp1b1Q99LU0 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms