Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdhga11Q91XY8 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga11Q91XY8 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga11Q91XY8 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga11Q91XY8 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga11Q91XY8 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Gm24830-201ENSMUST00000102024 166 ntBASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Gm39404-201ENSMUST00000216350 313 ntBASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Gm26232-201ENSMUST00000083360 166 ntBASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga11Q91XY8 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Gm23912-201ENSMUST00000104687 87 ntBASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Gm11793-201ENSMUST00000120433 981 ntBASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Gm14999-201ENSMUST00000121039 624 ntBASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Gm13570-201ENSMUST00000140763 309 ntBASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Gm27501-201ENSMUST00000183599 107 ntBASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Gm3961-201ENSMUST00000204425 994 ntBASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.71□□□□□ -0.53
Pcdhga11Q91XY8 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhga11Q91XY8 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhga11Q91XY8 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhga11Q91XY8 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhga11Q91XY8 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.71□□□□□ -0.54
Pcdhga11Q91XY8 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.71□□□□□ -0.54
Pcdhga11Q91XY8 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhga11Q91XY8 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.71□□□□□ -0.54
Pcdhga11Q91XY8 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhga11Q91XY8 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhga11Q91XY8 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.71□□□□□ -0.54
Pcdhga11Q91XY8 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms