Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim29Q8R2Q0 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim29Q8R2Q0 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim29Q8R2Q0 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim29Q8R2Q0 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim29Q8R2Q0 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Gm12015-201ENSMUST00000117065 843 ntBASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Gm14247-201ENSMUST00000120950 237 ntBASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Gm3961-201ENSMUST00000204425 994 ntBASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Gm45865-201ENSMUST00000211815 945 ntBASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim29Q8R2Q0 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim29Q8R2Q0 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Trim29Q8R2Q0 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Trim29Q8R2Q0 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim29Q8R2Q0 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim29Q8R2Q0 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim29Q8R2Q0 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 237.2 ms