Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Gm22133-201ENSMUST00000102082 109 ntBASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Gm25732-201ENSMUST00000175168 60 ntBASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Mir6979-201ENSMUST00000183927 56 ntBASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Lin28aQ8K3Y3 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Lin28aQ8K3Y3 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lin28aQ8K3Y3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Lin28aQ8K3Y3 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lin28aQ8K3Y3 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Lin28aQ8K3Y3 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lin28aQ8K3Y3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Lin28aQ8K3Y3 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.27□□□□□ -0.6
Lin28aQ8K3Y3 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lin28aQ8K3Y3 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lin28aQ8K3Y3 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Gm18711-201ENSMUST00000199341 750 ntBASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Gm17827-201ENSMUST00000211825 742 ntBASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Lin28aQ8K3Y3 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms