Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cystm1Q8K353 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cystm1Q8K353 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cystm1Q8K353 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cystm1Q8K353 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Cystm1Q8K353 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cystm1Q8K353 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.2
Cystm1Q8K353 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Cystm1Q8K353 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.2
Cystm1Q8K353 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Cystm1Q8K353 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC7.59□□□□□ -1.2
Cystm1Q8K353 Gm44369-201ENSMUST00000204543 2175 ntBASIC7.59□□□□□ -1.2
Cystm1Q8K353 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Cystm1Q8K353 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
Cystm1Q8K353 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC7.59□□□□□ -1.2
Cystm1Q8K353 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Gm37969-201ENSMUST00000195777 3409 ntBASIC7.58□□□□□ -1.2
Cystm1Q8K353 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Gm13050-201ENSMUST00000122149 1345 ntBASIC7.58□□□□□ -1.2
Cystm1Q8K353 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Gm12384-201ENSMUST00000119228 919 ntBASIC7.58□□□□□ -1.2
Cystm1Q8K353 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC7.58□□□□□ -1.2
Cystm1Q8K353 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC7.58□□□□□ -1.2
Cystm1Q8K353 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Ighv1-60-201ENSMUST00000195816 405 ntBASIC7.58□□□□□ -1.2
Cystm1Q8K353 Gm42442-201ENSMUST00000197951 1133 ntBASIC7.58□□□□□ -1.2
Cystm1Q8K353 Gm9728-201ENSMUST00000200197 1055 ntBASIC7.58□□□□□ -1.2
Cystm1Q8K353 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Gm6560-201ENSMUST00000198588 1591 ntBASIC7.58□□□□□ -1.2
Cystm1Q8K353 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cystm1Q8K353 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC7.57□□□□□ -1.2
Cystm1Q8K353 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cystm1Q8K353 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cystm1Q8K353 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC7.57□□□□□ -1.2
Cystm1Q8K353 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC7.57□□□□□ -1.2
Cystm1Q8K353 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC7.57□□□□□ -1.2
Cystm1Q8K353 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cystm1Q8K353 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cystm1Q8K353 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cystm1Q8K353 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cystm1Q8K353 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cystm1Q8K353 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
Cystm1Q8K353 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cystm1Q8K353 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cystm1Q8K353 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms