Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Gm7857-201ENSMUST00000117957 358 ntBASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Mir5120-201ENSMUST00000175020 78 ntBASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Gm43138-201ENSMUST00000199123 708 ntBASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup88Q8CEC0 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Gm26361-201ENSMUST00000158868 186 ntBASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Gm8018-201ENSMUST00000173536 789 ntBASIC14.23□□□□□ -0.13
Nup88Q8CEC0 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Gm9022-201ENSMUST00000182482 992 ntBASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Gm44882-201ENSMUST00000205702 802 ntBASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup88Q8CEC0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.22□□□□□ -0.13
Nup88Q8CEC0 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nup88Q8CEC0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms