Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.93□□□□□ -0.5
Lrif1Q8CDD9 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrif1Q8CDD9 Gm26185-201ENSMUST00000157692 266 ntBASIC11.93□□□□□ -0.5
Lrif1Q8CDD9 Gm9022-201ENSMUST00000182482 992 ntBASIC11.93□□□□□ -0.5
Lrif1Q8CDD9 Gm38002-201ENSMUST00000193255 180 ntBASIC11.93□□□□□ -0.5
Lrif1Q8CDD9 Gm37008-201ENSMUST00000195712 319 ntBASIC11.93□□□□□ -0.5
Lrif1Q8CDD9 Gm18054-201ENSMUST00000207539 555 ntBASIC11.93□□□□□ -0.5
Lrif1Q8CDD9 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lrif1Q8CDD9 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrif1Q8CDD9 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.93□□□□□ -0.5
Lrif1Q8CDD9 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lrif1Q8CDD9 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrif1Q8CDD9 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrif1Q8CDD9 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrif1Q8CDD9 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.93□□□□□ -0.5
Lrif1Q8CDD9 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrif1Q8CDD9 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrif1Q8CDD9 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrif1Q8CDD9 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrif1Q8CDD9 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrif1Q8CDD9 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lrif1Q8CDD9 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.93□□□□□ -0.5
Lrif1Q8CDD9 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Gm8805-201ENSMUST00000117848 313 ntBASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Gm7029-201ENSMUST00000173226 450 ntBASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Gm4768-201ENSMUST00000206199 686 ntBASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Gm45880-201ENSMUST00000213041 853 ntBASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lrif1Q8CDD9 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Gm16479-201ENSMUST00000121706 932 ntBASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Rmrp-201ENSMUST00000157463 271 ntBASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Gm19309-201ENSMUST00000218295 205 ntBASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.91□□□□□ -0.5
Lrif1Q8CDD9 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms