Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Aph1bQ8C7N7 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Aph1bQ8C7N7 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Aph1bQ8C7N7 Gm9823-201ENSMUST00000051212 327 ntBASIC11.9□□□□□ -0.5
Aph1bQ8C7N7 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.9□□□□□ -0.5
Aph1bQ8C7N7 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Aph1bQ8C7N7 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Aph1bQ8C7N7 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Aph1bQ8C7N7 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Aph1bQ8C7N7 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Aph1bQ8C7N7 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Aph1bQ8C7N7 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.9□□□□□ -0.5
Aph1bQ8C7N7 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.9□□□□□ -0.5
Aph1bQ8C7N7 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Aph1bQ8C7N7 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.9□□□□□ -0.5
Aph1bQ8C7N7 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Aph1bQ8C7N7 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Aph1bQ8C7N7 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.9□□□□□ -0.51
Aph1bQ8C7N7 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Aph1bQ8C7N7 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Gm37424-201ENSMUST00000191727 561 ntBASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Gm18893-201ENSMUST00000198416 943 ntBASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Aph1bQ8C7N7 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Gm45880-201ENSMUST00000213041 853 ntBASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Gm8712-201ENSMUST00000221090 701 ntBASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Aph1bQ8C7N7 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms