Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Gm14219-201ENSMUST00000120414 288 ntBASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Gm14247-201ENSMUST00000120950 237 ntBASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Gm45500-201ENSMUST00000211676 803 ntBASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Gm3551-201ENSMUST00000190750 664 ntBASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Gm5714-201ENSMUST00000197343 566 ntBASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Gm42816-201ENSMUST00000198433 325 ntBASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Mir671-201ENSMUST00000102432 98 ntBASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Col6a6Q8C6K9 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Mir6407-201ENSMUST00000184510 101 ntBASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Gm8531-201ENSMUST00000188319 893 ntBASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Gm3017-201ENSMUST00000203603 1126 ntBASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a6Q8C6K9 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms