Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Gm26083-201ENSMUST00000157904 193 ntBASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Gm27320-201ENSMUST00000184892 109 ntBASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Gm4857-201ENSMUST00000192718 785 ntBASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Gm31256-201ENSMUST00000194705 506 ntBASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Gm42599-201ENSMUST00000201308 469 ntBASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Gm44882-201ENSMUST00000205702 802 ntBASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Gm8712-201ENSMUST00000221090 701 ntBASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Gm24136-201ENSMUST00000083374 165 ntBASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4Q8BQZ5 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Gm14999-201ENSMUST00000121039 624 ntBASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4Q8BQZ5 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.68□□□□□ -0.54
Cpsf4Q8BQZ5 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms