Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Btrc-209ENSMUST00000224478 2194 ntBASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Gm14716-201ENSMUST00000120138 718 ntBASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Gm13315-201ENSMUST00000120376 991 ntBASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.82□□□□□ -0.36
Trim6Q8BGE7 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Gm5904-201ENSMUST00000210286 865 ntBASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Thoc7-209ENSMUST00000225325 765 ntBASIC12.82□□□□□ -0.36
Trim6Q8BGE7 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim6Q8BGE7 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Gm9083-201ENSMUST00000120423 819 ntBASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Gm26927-201ENSMUST00000182385 965 ntBASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Gm27839-201ENSMUST00000184242 106 ntBASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Gm18304-201ENSMUST00000189162 546 ntBASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim6Q8BGE7 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim6Q8BGE7 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms