Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Gm15003-201ENSMUST00000118884 446 ntBASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Gm26047-201ENSMUST00000157308 113 ntBASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Gm22379-201ENSMUST00000157480 131 ntBASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Gm26047-202ENSMUST00000198840 115 ntBASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Gm3433-201ENSMUST00000210149 1058 ntBASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Gm10263-201ENSMUST00000085163 300 ntBASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trnp1Q80ZI1 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 AC238811.4-201ENSMUST00000178019 1246 ntBASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 AC238940.3-201ENSMUST00000178830 1246 ntBASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Gm26982-201ENSMUST00000182250 1151 ntBASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Gm43912-201ENSMUST00000204352 538 ntBASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Gm18706-201ENSMUST00000210053 1066 ntBASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Gm6390-201ENSMUST00000215034 589 ntBASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trnp1Q80ZI1 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Gm5434-202ENSMUST00000222384 1451 ntBASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Gm5434-201ENSMUST00000071825 1451 ntBASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trnp1Q80ZI1 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms