Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Ccdc116Q80X53 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ccdc116Q80X53 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Gm17420-201ENSMUST00000164753 153 ntBASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Gm30285-201ENSMUST00000214614 422 ntBASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.83□□□□□ -0.52
Ccdc116Q80X53 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Gm12742-201ENSMUST00000117326 410 ntBASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Gm6621-201ENSMUST00000193251 772 ntBASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Gm17931-201ENSMUST00000208132 634 ntBASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Gm18935-201ENSMUST00000212692 664 ntBASIC11.82□□□□□ -0.52
Ccdc116Q80X53 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Gm10478-201ENSMUST00000084451 396 ntBASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc116Q80X53 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms