Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gm11511-201ENSMUST00000118146 540 ntBASIC11.55□□□□□ -0.56
Vrk1Q80X41 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Gm8100-201ENSMUST00000182906 988 ntBASIC11.55□□□□□ -0.56
Vrk1Q80X41 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Gm18711-201ENSMUST00000199341 750 ntBASIC11.55□□□□□ -0.56
Vrk1Q80X41 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Gm4607-201ENSMUST00000206649 577 ntBASIC11.55□□□□□ -0.56
Vrk1Q80X41 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.55□□□□□ -0.56
Vrk1Q80X41 Ginm1-202ENSMUST00000065124 300 ntBASIC11.55□□□□□ -0.56
Vrk1Q80X41 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Vrk1Q80X41 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.54□□□□□ -0.56
Vrk1Q80X41 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Gm12857-201ENSMUST00000117678 592 ntBASIC11.54□□□□□ -0.56
Vrk1Q80X41 Gm14724-201ENSMUST00000118400 537 ntBASIC11.54□□□□□ -0.56
Vrk1Q80X41 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Gm27438-201ENSMUST00000183480 110 ntBASIC11.54□□□□□ -0.56
Vrk1Q80X41 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.54□□□□□ -0.56
Vrk1Q80X41 Gm43916-201ENSMUST00000205062 967 ntBASIC11.54□□□□□ -0.56
Vrk1Q80X41 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.54□□□□□ -0.56
Vrk1Q80X41 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.54□□□□□ -0.56
Vrk1Q80X41 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Vrk1Q80X41 Matn2-203ENSMUST00000226766 3252 ntBASIC11.54□□□□□ -0.56
Vrk1Q80X41 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Vrk1Q80X41 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.53□□□□□ -0.56
Vrk1Q80X41 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.53□□□□□ -0.56
Vrk1Q80X41 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Gm26286-201ENSMUST00000104166 134 ntBASIC11.53□□□□□ -0.56
Vrk1Q80X41 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Gm11509-201ENSMUST00000117358 325 ntBASIC11.53□□□□□ -0.56
Vrk1Q80X41 Gm12208-201ENSMUST00000122004 163 ntBASIC11.53□□□□□ -0.56
Vrk1Q80X41 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vrk1Q80X41 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.53□□□□□ -0.56
Vrk1Q80X41 Gm2965-201ENSMUST00000198365 343 ntBASIC11.53□□□□□ -0.56
Vrk1Q80X41 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.53□□□□□ -0.56
Vrk1Q80X41 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.53□□□□□ -0.56
Vrk1Q80X41 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.53□□□□□ -0.56
Vrk1Q80X41 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms