Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ush1gQ80T11 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Ush1gQ80T11 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Ush1gQ80T11 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ush1gQ80T11 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Ush1gQ80T11 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ush1gQ80T11 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ush1gQ80T11 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.2□□□□□ -0.3
Ush1gQ80T11 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.2□□□□□ -0.3
Ush1gQ80T11 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.2□□□□□ -0.3
Ush1gQ80T11 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Gm9540-201ENSMUST00000188230 478 ntBASIC13.2□□□□□ -0.3
Ush1gQ80T11 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.2□□□□□ -0.3
Ush1gQ80T11 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.2□□□□□ -0.3
Ush1gQ80T11 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.2□□□□□ -0.3
Ush1gQ80T11 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.2□□□□□ -0.3
Ush1gQ80T11 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.19□□□□□ -0.3
Ush1gQ80T11 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.19□□□□□ -0.3
Ush1gQ80T11 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ush1gQ80T11 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Gm44124-201ENSMUST00000204159 472 ntBASIC13.19□□□□□ -0.3
Ush1gQ80T11 AC122408.1-201ENSMUST00000218949 218 ntBASIC13.19□□□□□ -0.3
Ush1gQ80T11 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.19□□□□□ -0.3
Ush1gQ80T11 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.18□□□□□ -0.3
Ush1gQ80T11 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ush1gQ80T11 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms