Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Gm6963-201ENSMUST00000147879 379 ntBASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Gm22442-201ENSMUST00000157256 144 ntBASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 CT010431.1-201ENSMUST00000221249 1080 ntBASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Gzmn-202ENSMUST00000225535 989 ntBASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Gm12015-201ENSMUST00000117065 843 ntBASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 AY036118-201ENSMUST00000200021 923 ntBASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Gm5369-201ENSMUST00000217499 588 ntBASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Prpf38bQ80SY5 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Prpf38bQ80SY5 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms