Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Gm11591-201ENSMUST00000120063 702 ntBASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Gm16177-201ENSMUST00000120728 718 ntBASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Gm12138-201ENSMUST00000122180 951 ntBASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Gm9002-201ENSMUST00000178437 499 ntBASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Gm8420-201ENSMUST00000097103 598 ntBASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scaf4Q6PFF0 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Gm14247-201ENSMUST00000120950 237 ntBASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Gm1335-201ENSMUST00000121653 386 ntBASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Gm29649-201ENSMUST00000185649 419 ntBASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scaf4Q6PFF0 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms