Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Gm15784-201ENSMUST00000120260 1462 ntBASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Gm14807-201ENSMUST00000116640 983 ntBASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Gm11801-201ENSMUST00000117807 746 ntBASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Gm17192-201ENSMUST00000169031 511 ntBASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Gm17709-201ENSMUST00000174536 1096 ntBASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 AC153929.1-201ENSMUST00000219009 303 ntBASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 CT009527.1-201ENSMUST00000224205 339 ntBASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 AC154589.2-201ENSMUST00000228847 251 ntBASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Gm9415-201ENSMUST00000200462 1321 ntBASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Gm43773-201ENSMUST00000198548 2162 ntBASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Gm13600-201ENSMUST00000117949 744 ntBASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 AC154572.1-201ENSMUST00000226098 1204 ntBASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Gm16380-201ENSMUST00000077997 478 ntBASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chd4Q6PDQ2 Gm7841-201ENSMUST00000122108 1629 ntBASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Gm43365-201ENSMUST00000196522 2106 ntBASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 AC125108.1-201ENSMUST00000218986 2330 ntBASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Gm18986-201ENSMUST00000216029 1986 ntBASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Gm8111-201ENSMUST00000117659 987 ntBASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 AC159002.1-201ENSMUST00000226714 924 ntBASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 AC165351.1-201ENSMUST00000219078 2020 ntBASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Chd4Q6PDQ2 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Gm27390-201ENSMUST00000184516 176 ntBASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Gm8436-201ENSMUST00000210152 1080 ntBASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Gm5749-201ENSMUST00000210673 1090 ntBASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 CT009536.2-201ENSMUST00000225370 665 ntBASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms