Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Gm12390-201ENSMUST00000117897 397 ntBASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Gm16379-201ENSMUST00000161469 348 ntBASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Gm6222-202ENSMUST00000182143 629 ntBASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Gm27023-201ENSMUST00000182372 285 ntBASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Gm8762-201ENSMUST00000193486 339 ntBASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Gm6266-201ENSMUST00000203844 806 ntBASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Gm39404-201ENSMUST00000216350 313 ntBASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Smarcd3Q6P9Z1 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms