Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Gm23931-201ENSMUST00000103842 109 ntBASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Gm23912-201ENSMUST00000104687 87 ntBASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Gm13392-201ENSMUST00000117708 150 ntBASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Gm12058-201ENSMUST00000118614 437 ntBASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Gm27023-201ENSMUST00000182372 285 ntBASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Gm27572-201ENSMUST00000183702 255 ntBASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Gm43630-201ENSMUST00000201550 776 ntBASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Gm45880-201ENSMUST00000213041 853 ntBASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Gm9899-201ENSMUST00000065519 555 ntBASIC13.32□□□□□ -0.28
Krt39Q6IFX4 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt39Q6IFX4 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.31□□□□□ -0.28
Krt39Q6IFX4 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.3□□□□□ -0.28
Krt39Q6IFX4 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Gm43438-201ENSMUST00000198133 379 ntBASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.3□□□□□ -0.28
Krt39Q6IFX4 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms