Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.25□□□□□ -0.13
Ctr9Q62018 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ctr9Q62018 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctr9Q62018 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctr9Q62018 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctr9Q62018 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctr9Q62018 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctr9Q62018 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctr9Q62018 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctr9Q62018 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctr9Q62018 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.24□□□□□ -0.13
Ctr9Q62018 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctr9Q62018 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctr9Q62018 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctr9Q62018 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctr9Q62018 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctr9Q62018 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ctr9Q62018 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctr9Q62018 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.24□□□□□ -0.13
Ctr9Q62018 Gm5419-201ENSMUST00000119301 527 ntBASIC14.24□□□□□ -0.13
Ctr9Q62018 Gm12566-201ENSMUST00000121479 359 ntBASIC14.24□□□□□ -0.13
Ctr9Q62018 Mir6979-201ENSMUST00000183927 56 ntBASIC14.24□□□□□ -0.13
Ctr9Q62018 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Ctr9Q62018 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.24□□□□□ -0.13
Ctr9Q62018 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ctr9Q62018 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ctr9Q62018 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctr9Q62018 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.24□□□□□ -0.13
Ctr9Q62018 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.24□□□□□ -0.13
Ctr9Q62018 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctr9Q62018 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ctr9Q62018 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctr9Q62018 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.24□□□□□ -0.13
Ctr9Q62018 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctr9Q62018 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctr9Q62018 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctr9Q62018 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctr9Q62018 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ctr9Q62018 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ctr9Q62018 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ctr9Q62018 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctr9Q62018 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctr9Q62018 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ctr9Q62018 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ctr9Q62018 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctr9Q62018 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctr9Q62018 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Ctr9Q62018 Gm11509-201ENSMUST00000117358 325 ntBASIC14.23□□□□□ -0.13
Ctr9Q62018 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.23□□□□□ -0.13
Ctr9Q62018 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.23□□□□□ -0.13
Ctr9Q62018 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.23□□□□□ -0.13
Ctr9Q62018 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ctr9Q62018 Gm18734-201ENSMUST00000172937 808 ntBASIC14.23□□□□□ -0.13
Ctr9Q62018 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ctr9Q62018 Gm27530-201ENSMUST00000184096 98 ntBASIC14.23□□□□□ -0.13
Ctr9Q62018 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.23□□□□□ -0.13
Ctr9Q62018 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.23□□□□□ -0.13
Ctr9Q62018 Gm7848-201ENSMUST00000210739 718 ntBASIC14.23□□□□□ -0.13
Ctr9Q62018 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ctr9Q62018 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.23□□□□□ -0.13
Ctr9Q62018 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Ctr9Q62018 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctr9Q62018 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctr9Q62018 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctr9Q62018 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctr9Q62018 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.23□□□□□ -0.13
Ctr9Q62018 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.23□□□□□ -0.13
Ctr9Q62018 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ctr9Q62018 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Ctr9Q62018 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ctr9Q62018 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctr9Q62018 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ctr9Q62018 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ctr9Q62018 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctr9Q62018 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctr9Q62018 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctr9Q62018 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ctr9Q62018 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctr9Q62018 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctr9Q62018 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctr9Q62018 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ctr9Q62018 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ctr9Q62018 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.22□□□□□ -0.13
Ctr9Q62018 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ctr9Q62018 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ctr9Q62018 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctr9Q62018 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ctr9Q62018 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctr9Q62018 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.22□□□□□ -0.13
Ctr9Q62018 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctr9Q62018 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC14.22□□□□□ -0.13
Ctr9Q62018 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.22□□□□□ -0.13
Ctr9Q62018 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.22□□□□□ -0.13
Ctr9Q62018 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.22□□□□□ -0.13
Ctr9Q62018 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.22□□□□□ -0.13
Ctr9Q62018 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC14.22□□□□□ -0.13
Ctr9Q62018 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ctr9Q62018 Gm5706-201ENSMUST00000181525 993 ntBASIC14.22□□□□□ -0.13
Ctr9Q62018 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ctr9Q62018 Mir7677-201ENSMUST00000184226 67 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms