Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Foxc1Q61572 Gm16149-201ENSMUST00000117631 309 ntBASIC9.2□□□□□ -0.94
Foxc1Q61572 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC9.2□□□□□ -0.94
Foxc1Q61572 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC9.2□□□□□ -0.94
Foxc1Q61572 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Foxc1Q61572 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC9.2□□□□□ -0.94
Foxc1Q61572 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC9.2□□□□□ -0.94
Foxc1Q61572 Gm21301-201ENSMUST00000189476 699 ntBASIC9.2□□□□□ -0.94
Foxc1Q61572 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC9.2□□□□□ -0.94
Foxc1Q61572 Gm5896-201ENSMUST00000189662 1024 ntBASIC9.2□□□□□ -0.94
Foxc1Q61572 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC9.2□□□□□ -0.94
Foxc1Q61572 Gm38154-201ENSMUST00000195444 340 ntBASIC9.2□□□□□ -0.94
Foxc1Q61572 BB187690-201ENSMUST00000198619 1176 ntBASIC9.2□□□□□ -0.94
Foxc1Q61572 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC9.2□□□□□ -0.94
Foxc1Q61572 Gm44823-201ENSMUST00000204775 1107 ntBASIC9.2□□□□□ -0.94
Foxc1Q61572 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC9.2□□□□□ -0.94
Foxc1Q61572 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC9.2□□□□□ -0.94
Foxc1Q61572 Gm4935-201ENSMUST00000221316 1198 ntBASIC9.2□□□□□ -0.94
Foxc1Q61572 AC158392.1-201ENSMUST00000223720 1069 ntBASIC9.2□□□□□ -0.94
Foxc1Q61572 AC154361.1-201ENSMUST00000225694 745 ntBASIC9.2□□□□□ -0.94
Foxc1Q61572 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Foxc1Q61572 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Foxc1Q61572 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 CT025624.1-201ENSMUST00000224007 2700 ntBASIC9.2□□□□□ -0.94
Foxc1Q61572 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Foxc1Q61572 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Foxc1Q61572 AC132384.4-201ENSMUST00000220343 1397 ntBASIC9.2□□□□□ -0.94
Foxc1Q61572 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC9.2□□□□□ -0.94
Foxc1Q61572 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC9.2□□□□□ -0.94
Foxc1Q61572 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC9.2□□□□□ -0.94
Foxc1Q61572 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 AC122314.1-201ENSMUST00000223056 2239 ntBASIC9.2□□□□□ -0.94
Foxc1Q61572 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Foxc1Q61572 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Foxc1Q61572 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Foxc1Q61572 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Gm43721-201ENSMUST00000199677 2313 ntBASIC9.2□□□□□ -0.94
Foxc1Q61572 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
Foxc1Q61572 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC9.19□□□□□ -0.94
Foxc1Q61572 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Foxc1Q61572 Map1b-203ENSMUST00000223725 2669 ntBASIC9.19□□□□□ -0.94
Foxc1Q61572 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Foxc1Q61572 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC9.19□□□□□ -0.94
Foxc1Q61572 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Foxc1Q61572 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Foxc1Q61572 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Foxc1Q61572 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Gm13678-201ENSMUST00000118926 340 ntBASIC9.19□□□□□ -0.94
Foxc1Q61572 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC9.19□□□□□ -0.94
Foxc1Q61572 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC9.19□□□□□ -0.94
Foxc1Q61572 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC9.19□□□□□ -0.94
Foxc1Q61572 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC9.19□□□□□ -0.94
Foxc1Q61572 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Gm27516-201ENSMUST00000184237 98 ntBASIC9.19□□□□□ -0.94
Foxc1Q61572 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
Foxc1Q61572 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC9.19□□□□□ -0.94
Foxc1Q61572 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 D530037P16Rik-201ENSMUST00000199255 1027 ntBASIC9.19□□□□□ -0.94
Foxc1Q61572 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC9.19□□□□□ -0.94
Foxc1Q61572 Speer6-ps1-203ENSMUST00000223482 979 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 AC133598.1-201ENSMUST00000224327 660 ntBASIC9.19□□□□□ -0.94
Foxc1Q61572 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Foxc1Q61572 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC9.19□□□□□ -0.94
Foxc1Q61572 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC9.19□□□□□ -0.94
Foxc1Q61572 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Foxc1Q61572 Gm6655-201ENSMUST00000201932 1309 ntBASIC9.19□□□□□ -0.94
Foxc1Q61572 Gm19210-201ENSMUST00000199562 1350 ntBASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms