Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ecm1Q61508 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ecm1Q61508 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.3□□□□□ -0.28
Ecm1Q61508 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ecm1Q61508 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Ecm1Q61508 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.3□□□□□ -0.28
Ecm1Q61508 Gm28937-201ENSMUST00000185413 695 ntBASIC13.3□□□□□ -0.28
Ecm1Q61508 Gm29400-201ENSMUST00000187208 695 ntBASIC13.3□□□□□ -0.28
Ecm1Q61508 Gm8531-201ENSMUST00000188319 893 ntBASIC13.3□□□□□ -0.28
Ecm1Q61508 Gm28662-201ENSMUST00000188446 695 ntBASIC13.3□□□□□ -0.28
Ecm1Q61508 Gm28251-201ENSMUST00000188835 695 ntBASIC13.3□□□□□ -0.28
Ecm1Q61508 Gm37318-201ENSMUST00000194325 695 ntBASIC13.3□□□□□ -0.28
Ecm1Q61508 Gm38017-201ENSMUST00000194768 695 ntBASIC13.3□□□□□ -0.28
Ecm1Q61508 Gm37287-201ENSMUST00000195449 695 ntBASIC13.3□□□□□ -0.28
Ecm1Q61508 Gm37793-201ENSMUST00000195548 695 ntBASIC13.3□□□□□ -0.28
Ecm1Q61508 Gm45594-201ENSMUST00000211717 241 ntBASIC13.3□□□□□ -0.28
Ecm1Q61508 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ecm1Q61508 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ecm1Q61508 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.3□□□□□ -0.28
Ecm1Q61508 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ecm1Q61508 Gm5451-201ENSMUST00000080545 579 ntBASIC13.3□□□□□ -0.28
Ecm1Q61508 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.3□□□□□ -0.28
Ecm1Q61508 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Ecm1Q61508 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ecm1Q61508 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ecm1Q61508 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.3□□□□□ -0.28
Ecm1Q61508 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ecm1Q61508 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ecm1Q61508 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ecm1Q61508 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ecm1Q61508 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ecm1Q61508 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.3□□□□□ -0.28
Ecm1Q61508 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ecm1Q61508 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.29□□□□□ -0.28
Ecm1Q61508 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Ecm1Q61508 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ecm1Q61508 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Ecm1Q61508 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ecm1Q61508 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ecm1Q61508 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ecm1Q61508 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ecm1Q61508 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ecm1Q61508 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC13.29□□□□□ -0.28
Ecm1Q61508 Gm23272-201ENSMUST00000104053 129 ntBASIC13.29□□□□□ -0.28
Ecm1Q61508 Gm25880-201ENSMUST00000104331 132 ntBASIC13.29□□□□□ -0.28
Ecm1Q61508 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.29□□□□□ -0.28
Ecm1Q61508 Gm11340-201ENSMUST00000119226 412 ntBASIC13.29□□□□□ -0.28
Ecm1Q61508 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ecm1Q61508 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.29□□□□□ -0.28
Ecm1Q61508 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ecm1Q61508 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ecm1Q61508 Gm6407-201ENSMUST00000176468 549 ntBASIC13.29□□□□□ -0.28
Ecm1Q61508 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ecm1Q61508 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.29□□□□□ -0.28
Ecm1Q61508 Gm9192-201ENSMUST00000183221 985 ntBASIC13.29□□□□□ -0.28
Ecm1Q61508 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
Ecm1Q61508 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ecm1Q61508 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC13.29□□□□□ -0.28
Ecm1Q61508 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.29□□□□□ -0.28
Ecm1Q61508 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.29□□□□□ -0.28
Ecm1Q61508 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ecm1Q61508 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ecm1Q61508 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ecm1Q61508 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ecm1Q61508 Gm3765-201ENSMUST00000130985 1447 ntBASIC13.29□□□□□ -0.28
Ecm1Q61508 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ecm1Q61508 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ecm1Q61508 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.28□□□□□ -0.28
Ecm1Q61508 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Ecm1Q61508 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ecm1Q61508 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ecm1Q61508 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ecm1Q61508 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.28□□□□□ -0.28
Ecm1Q61508 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ecm1Q61508 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ecm1Q61508 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ecm1Q61508 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ecm1Q61508 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ecm1Q61508 Gm8574-201ENSMUST00000203207 924 ntBASIC13.28□□□□□ -0.28
Ecm1Q61508 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Ecm1Q61508 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ecm1Q61508 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ecm1Q61508 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ecm1Q61508 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ecm1Q61508 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ecm1Q61508 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ecm1Q61508 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ecm1Q61508 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.28□□□□□ -0.28
Ecm1Q61508 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ecm1Q61508 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ecm1Q61508 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ecm1Q61508 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ecm1Q61508 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ecm1Q61508 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Ecm1Q61508 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ecm1Q61508 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ecm1Q61508 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ecm1Q61508 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Ecm1Q61508 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ecm1Q61508 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms