Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.6□□□□□ -0.55
ClpbQ60649 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Gm14832-201ENSMUST00000121289 322 ntBASIC11.6□□□□□ -0.55
ClpbQ60649 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Gm23119-201ENSMUST00000158610 140 ntBASIC11.6□□□□□ -0.55
ClpbQ60649 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.6□□□□□ -0.55
ClpbQ60649 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.6□□□□□ -0.55
ClpbQ60649 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Gm35960-201ENSMUST00000202712 767 ntBASIC11.6□□□□□ -0.55
ClpbQ60649 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.6□□□□□ -0.55
ClpbQ60649 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
ClpbQ60649 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.6□□□□□ -0.55
ClpbQ60649 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
ClpbQ60649 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
ClpbQ60649 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.6□□□□□ -0.55
ClpbQ60649 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.59□□□□□ -0.55
ClpbQ60649 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
ClpbQ60649 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.59□□□□□ -0.55
ClpbQ60649 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 Gm14130-201ENSMUST00000118417 987 ntBASIC11.59□□□□□ -0.55
ClpbQ60649 Gm9083-201ENSMUST00000120423 819 ntBASIC11.59□□□□□ -0.55
ClpbQ60649 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
ClpbQ60649 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
ClpbQ60649 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
ClpbQ60649 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 Gm44967-201ENSMUST00000207047 631 ntBASIC11.59□□□□□ -0.55
ClpbQ60649 Gm44651-201ENSMUST00000207343 372 ntBASIC11.59□□□□□ -0.55
ClpbQ60649 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.59□□□□□ -0.55
ClpbQ60649 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.59□□□□□ -0.55
ClpbQ60649 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
ClpbQ60649 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.59□□□□□ -0.55
ClpbQ60649 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClpbQ60649 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
ClpbQ60649 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.58□□□□□ -0.56
ClpbQ60649 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.58□□□□□ -0.56
ClpbQ60649 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
ClpbQ60649 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
ClpbQ60649 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ClpbQ60649 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.58□□□□□ -0.56
ClpbQ60649 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.58□□□□□ -0.56
ClpbQ60649 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.58□□□□□ -0.56
ClpbQ60649 Gm24845-201ENSMUST00000158034 109 ntBASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms