Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Gm15610-201ENSMUST00000120584 195 ntBASIC12.53□□□□□ -0.4
Trim38Q5SZ99 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Gm3096-201ENSMUST00000185770 364 ntBASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Gm9230-201ENSMUST00000188228 532 ntBASIC12.53□□□□□ -0.4
Trim38Q5SZ99 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Gm7399-201ENSMUST00000032395 858 ntBASIC12.53□□□□□ -0.4
Trim38Q5SZ99 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.52□□□□□ -0.4
Trim38Q5SZ99 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim38Q5SZ99 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim38Q5SZ99 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim38Q5SZ99 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim38Q5SZ99 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.4
Trim38Q5SZ99 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.52□□□□□ -0.4
Trim38Q5SZ99 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.52□□□□□ -0.41
Trim38Q5SZ99 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Gm31256-201ENSMUST00000194705 506 ntBASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Gm21769-201ENSMUST00000211922 111 ntBASIC12.52□□□□□ -0.41
Trim38Q5SZ99 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Gm8712-201ENSMUST00000221090 701 ntBASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.52□□□□□ -0.41
Trim38Q5SZ99 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim38Q5SZ99 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Gm14726-201ENSMUST00000120623 896 ntBASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Gm2991-201ENSMUST00000173338 480 ntBASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Gm38241-201ENSMUST00000192641 898 ntBASIC12.51□□□□□ -0.41
Trim38Q5SZ99 Gm6621-201ENSMUST00000193251 772 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms