Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Gm15371-201ENSMUST00000117057 784 ntBASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Gm11524-201ENSMUST00000119349 807 ntBASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Gm13616-201ENSMUST00000120600 222 ntBASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Gm27838-201ENSMUST00000184829 128 ntBASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Gm37277-201ENSMUST00000194052 1111 ntBASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Gm5279-201ENSMUST00000199575 745 ntBASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 AC139580.1-202ENSMUST00000223574 928 ntBASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Gm38037-201ENSMUST00000192600 1624 ntBASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Gm29245-201ENSMUST00000187332 1416 ntBASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Gm12799-201ENSMUST00000118151 2560 ntBASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Gm12537-201ENSMUST00000119266 1002 ntBASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Gm12070-201ENSMUST00000119551 1002 ntBASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Gm12671-201ENSMUST00000119978 1002 ntBASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Gm13292-201ENSMUST00000120014 1000 ntBASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Gm12403-201ENSMUST00000121384 959 ntBASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Gm10359-201ENSMUST00000180167 1002 ntBASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Gm12033-201ENSMUST00000180654 1002 ntBASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Gm5559-201ENSMUST00000180755 1002 ntBASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Gm4335-201ENSMUST00000182581 1004 ntBASIC9.04□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms