Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.31□□□□□ -0.44
Spire1Q52KF3 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Paupar-201ENSMUST00000194826 3482 ntBASIC12.31□□□□□ -0.44
Spire1Q52KF3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.3□□□□□ -0.44
Spire1Q52KF3 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.3□□□□□ -0.44
Spire1Q52KF3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Gm12579-201ENSMUST00000118040 783 ntBASIC12.3□□□□□ -0.44
Spire1Q52KF3 Gm8731-201ENSMUST00000118088 412 ntBASIC12.3□□□□□ -0.44
Spire1Q52KF3 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.3□□□□□ -0.44
Spire1Q52KF3 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Gm9358-201ENSMUST00000183067 927 ntBASIC12.3□□□□□ -0.44
Spire1Q52KF3 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Gm38117-201ENSMUST00000194653 939 ntBASIC12.3□□□□□ -0.44
Spire1Q52KF3 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.3□□□□□ -0.44
Spire1Q52KF3 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.3□□□□□ -0.44
Spire1Q52KF3 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Spire1Q52KF3 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.3□□□□□ -0.44
Spire1Q52KF3 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.3□□□□□ -0.44
Spire1Q52KF3 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.3□□□□□ -0.44
Spire1Q52KF3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.3□□□□□ -0.44
Spire1Q52KF3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.3□□□□□ -0.44
Spire1Q52KF3 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.29□□□□□ -0.44
Spire1Q52KF3 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Gm17931-201ENSMUST00000208132 634 ntBASIC12.29□□□□□ -0.44
Spire1Q52KF3 Gm7600-201ENSMUST00000209657 785 ntBASIC12.29□□□□□ -0.44
Spire1Q52KF3 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.29□□□□□ -0.44
Spire1Q52KF3 Snora73b-201ENSMUST00000083419 205 ntBASIC12.29□□□□□ -0.44
Spire1Q52KF3 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spire1Q52KF3 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Spire1Q52KF3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Spire1Q52KF3 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.29□□□□□ -0.44
Spire1Q52KF3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms