Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Rubie-203ENSMUST00000227803 2430 ntBASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Gm12516-201ENSMUST00000120819 385 ntBASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Mir6958-201ENSMUST00000184207 73 ntBASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Gm9645-201ENSMUST00000197131 792 ntBASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Upf3aQ3ULJ3 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Gm11836-201ENSMUST00000121022 441 ntBASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Gm16397-201ENSMUST00000122201 494 ntBASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Gm6485-201ENSMUST00000160676 439 ntBASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upf3aQ3ULJ3 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms