Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm13813-201ENSMUST00000120998 787 ntBASIC9.88□□□□□ -0.83
Trim63Q38HM4 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Ap1g1-206ENSMUST00000179104 1096 ntBASIC9.88□□□□□ -0.83
Trim63Q38HM4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Gm45453-201ENSMUST00000211758 853 ntBASIC9.88□□□□□ -0.83
Trim63Q38HM4 AC131709.1-201ENSMUST00000224731 1180 ntBASIC9.88□□□□□ -0.83
Trim63Q38HM4 AC173482.3-201ENSMUST00000225492 1212 ntBASIC9.88□□□□□ -0.83
Trim63Q38HM4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC9.88□□□□□ -0.83
Trim63Q38HM4 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Gm30132-201ENSMUST00000212816 8757 ntTSL 5 BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Sardh-202ENSMUST00000102886 4521 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Gm17980-201ENSMUST00000217977 2349 ntBASIC9.87□□□□□ -0.83
Trim63Q38HM4 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Gm6912-201ENSMUST00000117218 544 ntBASIC9.87□□□□□ -0.83
Trim63Q38HM4 Gm24420-201ENSMUST00000176676 59 ntBASIC9.87□□□□□ -0.83
Trim63Q38HM4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trim63Q38HM4 AC098716.1-201ENSMUST00000213527 703 ntBASIC9.87□□□□□ -0.83
Trim63Q38HM4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim63Q38HM4 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trim63Q38HM4 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC9.87□□□□□ -0.83
Trim63Q38HM4 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.86□□□□□ -0.83
Trim63Q38HM4 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Gm9385-201ENSMUST00000117563 472 ntBASIC9.86□□□□□ -0.83
Trim63Q38HM4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms