Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.25□□□□□ -0.45
Ebf1Q07802 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.25□□□□□ -0.45
Ebf1Q07802 Gm12196-201ENSMUST00000120954 262 ntBASIC12.25□□□□□ -0.45
Ebf1Q07802 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.25□□□□□ -0.45
Ebf1Q07802 Gm8194-201ENSMUST00000159783 859 ntBASIC12.25□□□□□ -0.45
Ebf1Q07802 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Gm17391-201ENSMUST00000171036 126 ntBASIC12.25□□□□□ -0.45
Ebf1Q07802 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.25□□□□□ -0.45
Ebf1Q07802 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.25□□□□□ -0.45
Ebf1Q07802 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.25□□□□□ -0.45
Ebf1Q07802 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Ebf1Q07802 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.25□□□□□ -0.45
Ebf1Q07802 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.25□□□□□ -0.45
Ebf1Q07802 Gm10752-201ENSMUST00000218348 729 ntBASIC12.25□□□□□ -0.45
Ebf1Q07802 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.25□□□□□ -0.45
Ebf1Q07802 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.25□□□□□ -0.45
Ebf1Q07802 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.25□□□□□ -0.45
Ebf1Q07802 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.25□□□□□ -0.45
Ebf1Q07802 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.25□□□□□ -0.45
Ebf1Q07802 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.25□□□□□ -0.45
Ebf1Q07802 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.25□□□□□ -0.45
Ebf1Q07802 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.25□□□□□ -0.45
Ebf1Q07802 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.25□□□□□ -0.45
Ebf1Q07802 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.25□□□□□ -0.45
Ebf1Q07802 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.25□□□□□ -0.45
Ebf1Q07802 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ebf1Q07802 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ebf1Q07802 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.25□□□□□ -0.45
Ebf1Q07802 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ebf1Q07802 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Ebf1Q07802 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Gm24934-201ENSMUST00000103764 111 ntBASIC12.24□□□□□ -0.45
Ebf1Q07802 Gm23596-201ENSMUST00000104304 132 ntBASIC12.24□□□□□ -0.45
Ebf1Q07802 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Ebf1Q07802 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.24□□□□□ -0.45
Ebf1Q07802 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.24□□□□□ -0.45
Ebf1Q07802 Gm12029-201ENSMUST00000120073 832 ntBASIC12.24□□□□□ -0.45
Ebf1Q07802 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.24□□□□□ -0.45
Ebf1Q07802 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
Ebf1Q07802 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.24□□□□□ -0.45
Ebf1Q07802 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.24□□□□□ -0.45
Ebf1Q07802 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ebf1Q07802 Gm44958-201ENSMUST00000203734 736 ntBASIC12.24□□□□□ -0.45
Ebf1Q07802 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.24□□□□□ -0.45
Ebf1Q07802 Gm45550-201ENSMUST00000209380 946 ntBASIC12.24□□□□□ -0.45
Ebf1Q07802 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.24□□□□□ -0.45
Ebf1Q07802 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ebf1Q07802 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.24□□□□□ -0.45
Ebf1Q07802 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.24□□□□□ -0.45
Ebf1Q07802 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ebf1Q07802 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Ebf1Q07802 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.24□□□□□ -0.45
Ebf1Q07802 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Ebf1Q07802 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.24□□□□□ -0.45
Ebf1Q07802 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms