Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Rprl1-201ENSMUST00000158050 327 ntBASIC12.66□□□□□ -0.38
Cntn3Q07409 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.66□□□□□ -0.38
Cntn3Q07409 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Gm18711-201ENSMUST00000199341 750 ntBASIC12.66□□□□□ -0.38
Cntn3Q07409 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cntn3Q07409 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.66□□□□□ -0.38
Cntn3Q07409 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.66□□□□□ -0.38
Cntn3Q07409 Gm5455-201ENSMUST00000058710 715 ntBASIC12.66□□□□□ -0.38
Cntn3Q07409 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cntn3Q07409 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cntn3Q07409 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.66□□□□□ -0.38
Cntn3Q07409 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn3Q07409 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn3Q07409 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.65□□□□□ -0.38
Cntn3Q07409 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn3Q07409 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn3Q07409 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn3Q07409 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn3Q07409 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn3Q07409 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn3Q07409 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn3Q07409 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.65□□□□□ -0.38
Cntn3Q07409 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn3Q07409 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn3Q07409 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Cntn3Q07409 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.65□□□□□ -0.38
Cntn3Q07409 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.65□□□□□ -0.38
Cntn3Q07409 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.65□□□□□ -0.38
Cntn3Q07409 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.65□□□□□ -0.38
Cntn3Q07409 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.65□□□□□ -0.38
Cntn3Q07409 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn3Q07409 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.65□□□□□ -0.38
Cntn3Q07409 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn3Q07409 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cntn3Q07409 AU022133-201ENSMUST00000200601 873 ntBASIC12.65□□□□□ -0.38
Cntn3Q07409 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Cntn3Q07409 Gm17827-201ENSMUST00000211825 742 ntBASIC12.65□□□□□ -0.38
Cntn3Q07409 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn3Q07409 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn3Q07409 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn3Q07409 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn3Q07409 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn3Q07409 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn3Q07409 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn3Q07409 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn3Q07409 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn3Q07409 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn3Q07409 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn3Q07409 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Cntn3Q07409 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.39
Cntn3Q07409 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cntn3Q07409 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cntn3Q07409 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.64□□□□□ -0.39
Cntn3Q07409 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cntn3Q07409 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cntn3Q07409 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cntn3Q07409 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cntn3Q07409 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cntn3Q07409 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.64□□□□□ -0.39
Cntn3Q07409 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cntn3Q07409 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cntn3Q07409 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.64□□□□□ -0.39
Cntn3Q07409 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cntn3Q07409 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cntn3Q07409 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cntn3Q07409 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cntn3Q07409 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cntn3Q07409 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.64□□□□□ -0.39
Cntn3Q07409 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cntn3Q07409 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cntn3Q07409 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cntn3Q07409 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cntn3Q07409 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cntn3Q07409 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cntn3Q07409 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cntn3Q07409 Gm23912-201ENSMUST00000104687 87 ntBASIC12.64□□□□□ -0.39
Cntn3Q07409 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cntn3Q07409 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cntn3Q07409 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cntn3Q07409 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms