Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.67□□□□□ -0.22
GabpaQ00422 Gm44124-201ENSMUST00000204159 472 ntBASIC13.67□□□□□ -0.22
GabpaQ00422 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.67□□□□□ -0.22
GabpaQ00422 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GabpaQ00422 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.67□□□□□ -0.22
GabpaQ00422 AC134860.1-201ENSMUST00000224867 660 ntBASIC13.67□□□□□ -0.22
GabpaQ00422 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GabpaQ00422 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GabpaQ00422 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.67□□□□□ -0.22
GabpaQ00422 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
GabpaQ00422 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
GabpaQ00422 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GabpaQ00422 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
GabpaQ00422 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.67□□□□□ -0.22
GabpaQ00422 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
GabpaQ00422 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.67□□□□□ -0.22
GabpaQ00422 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GabpaQ00422 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
GabpaQ00422 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GabpaQ00422 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
GabpaQ00422 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GabpaQ00422 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GabpaQ00422 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.66□□□□□ -0.22
GabpaQ00422 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
GabpaQ00422 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.66□□□□□ -0.22
GabpaQ00422 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
GabpaQ00422 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.66□□□□□ -0.22
GabpaQ00422 Gm15573-201ENSMUST00000119487 540 ntBASIC13.66□□□□□ -0.22
GabpaQ00422 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.66□□□□□ -0.22
GabpaQ00422 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.66□□□□□ -0.22
GabpaQ00422 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
GabpaQ00422 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
GabpaQ00422 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.66□□□□□ -0.22
GabpaQ00422 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
GabpaQ00422 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.66□□□□□ -0.22
GabpaQ00422 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
GabpaQ00422 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
GabpaQ00422 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GabpaQ00422 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GabpaQ00422 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC13.65□□□□□ -0.22
GabpaQ00422 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.65□□□□□ -0.22
GabpaQ00422 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GabpaQ00422 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GabpaQ00422 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GabpaQ00422 Gm12029-201ENSMUST00000120073 832 ntBASIC13.65□□□□□ -0.22
GabpaQ00422 Gm12208-201ENSMUST00000122004 163 ntBASIC13.65□□□□□ -0.22
GabpaQ00422 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GabpaQ00422 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.65□□□□□ -0.22
GabpaQ00422 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GabpaQ00422 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GabpaQ00422 Gm19287-201ENSMUST00000203190 358 ntBASIC13.65□□□□□ -0.22
GabpaQ00422 Gm17831-201ENSMUST00000205579 900 ntBASIC13.65□□□□□ -0.22
GabpaQ00422 Gm44545-201ENSMUST00000208262 746 ntBASIC13.65□□□□□ -0.22
GabpaQ00422 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GabpaQ00422 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.65□□□□□ -0.22
GabpaQ00422 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GabpaQ00422 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.65□□□□□ -0.22
GabpaQ00422 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
GabpaQ00422 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GabpaQ00422 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.65□□□□□ -0.22
GabpaQ00422 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GabpaQ00422 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GabpaQ00422 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GabpaQ00422 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GabpaQ00422 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
GabpaQ00422 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GabpaQ00422 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GabpaQ00422 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GabpaQ00422 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GabpaQ00422 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.65□□□□□ -0.22
GabpaQ00422 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GabpaQ00422 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.64□□□□□ -0.23
GabpaQ00422 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GabpaQ00422 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
GabpaQ00422 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GabpaQ00422 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms