Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
SgcaP82350 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
SgcaP82350 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Syt7-204ENSMUST00000223586 1344 ntBASIC10.11□□□□□ -0.79
SgcaP82350 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Gm44745-201ENSMUST00000206563 2723 ntBASIC10.11□□□□□ -0.79
SgcaP82350 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.11□□□□□ -0.79
SgcaP82350 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Gm22189-201ENSMUST00000103822 86 ntBASIC10.11□□□□□ -0.79
SgcaP82350 Gm15321-201ENSMUST00000121290 288 ntBASIC10.11□□□□□ -0.79
SgcaP82350 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Rmrp-201ENSMUST00000157463 271 ntBASIC10.11□□□□□ -0.79
SgcaP82350 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
SgcaP82350 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.11□□□□□ -0.79
SgcaP82350 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
SgcaP82350 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.11□□□□□ -0.79
SgcaP82350 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC10.11□□□□□ -0.79
SgcaP82350 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.11□□□□□ -0.79
SgcaP82350 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.11□□□□□ -0.79
SgcaP82350 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
SgcaP82350 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
SgcaP82350 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.11□□□□□ -0.79
SgcaP82350 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
SgcaP82350 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.11□□□□□ -0.79
SgcaP82350 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.11□□□□□ -0.79
SgcaP82350 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
SgcaP82350 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SgcaP82350 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
SgcaP82350 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
SgcaP82350 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.1□□□□□ -0.79
SgcaP82350 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
SgcaP82350 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.1□□□□□ -0.79
SgcaP82350 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
SgcaP82350 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
SgcaP82350 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
SgcaP82350 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Gm26185-201ENSMUST00000157692 266 ntBASIC10.1□□□□□ -0.79
SgcaP82350 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.1□□□□□ -0.79
SgcaP82350 Gm44882-201ENSMUST00000205702 802 ntBASIC10.1□□□□□ -0.79
SgcaP82350 Gm18473-201ENSMUST00000220543 868 ntBASIC10.1□□□□□ -0.79
SgcaP82350 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.1□□□□□ -0.79
SgcaP82350 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC10.1□□□□□ -0.79
SgcaP82350 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
SgcaP82350 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.1□□□□□ -0.79
SgcaP82350 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.1□□□□□ -0.79
SgcaP82350 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SgcaP82350 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SgcaP82350 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.09□□□□□ -0.79
SgcaP82350 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms