Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.24□□□□□ -0.61
SgcdP82347 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
SgcdP82347 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.24□□□□□ -0.61
SgcdP82347 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.24□□□□□ -0.61
SgcdP82347 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.24□□□□□ -0.61
SgcdP82347 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SgcdP82347 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
SgcdP82347 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.23□□□□□ -0.61
SgcdP82347 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.23□□□□□ -0.61
SgcdP82347 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SgcdP82347 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.23□□□□□ -0.61
SgcdP82347 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.23□□□□□ -0.61
SgcdP82347 Gm14723-201ENSMUST00000118686 215 ntBASIC11.23□□□□□ -0.61
SgcdP82347 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Gm24196-201ENSMUST00000179161 110 ntBASIC11.23□□□□□ -0.61
SgcdP82347 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.23□□□□□ -0.61
SgcdP82347 Gm3961-201ENSMUST00000204425 994 ntBASIC11.23□□□□□ -0.61
SgcdP82347 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.23□□□□□ -0.61
SgcdP82347 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.23□□□□□ -0.61
SgcdP82347 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.23□□□□□ -0.61
SgcdP82347 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
SgcdP82347 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
SgcdP82347 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
SgcdP82347 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.23□□□□□ -0.61
SgcdP82347 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcdP82347 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SgcdP82347 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Gm14350-201ENSMUST00000116642 640 ntBASIC11.22□□□□□ -0.61
SgcdP82347 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.22□□□□□ -0.61
SgcdP82347 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
SgcdP82347 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.22□□□□□ -0.61
SgcdP82347 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.22□□□□□ -0.61
SgcdP82347 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.22□□□□□ -0.61
SgcdP82347 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.22□□□□□ -0.61
SgcdP82347 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
SgcdP82347 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SgcdP82347 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcdP82347 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms