Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm14441-201ENSMUST00000121960 540 ntBASIC19.35■□□□□ 0.69
Cux2P70298 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC19.35■□□□□ 0.69
Cux2P70298 Gm29304-201ENSMUST00000186555 695 ntBASIC19.35■□□□□ 0.69
Cux2P70298 Gm29223-201ENSMUST00000188867 695 ntBASIC19.35■□□□□ 0.69
Cux2P70298 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cux2P70298 Gm37921-201ENSMUST00000194333 695 ntBASIC19.35■□□□□ 0.69
Cux2P70298 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cux2P70298 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cux2P70298 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Cux2P70298 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cux2P70298 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cux2P70298 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cux2P70298 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cux2P70298 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC19.35■□□□□ 0.69
Cux2P70298 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cux2P70298 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cux2P70298 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cux2P70298 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cux2P70298 AC107763.1-201ENSMUST00000226082 1365 ntBASIC19.35■□□□□ 0.69
Cux2P70298 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cux2P70298 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC19.34■□□□□ 0.69
Cux2P70298 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cux2P70298 Gm15136-201ENSMUST00000120552 533 ntBASIC19.34■□□□□ 0.69
Cux2P70298 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 Gm30946-201ENSMUST00000198288 724 ntBASIC19.34■□□□□ 0.69
Cux2P70298 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC19.34■□□□□ 0.69
Cux2P70298 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC19.34■□□□□ 0.69
Cux2P70298 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Cux2P70298 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cux2P70298 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC19.34■□□□□ 0.69
Cux2P70298 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cux2P70298 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC19.34■□□□□ 0.69
Cux2P70298 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Cux2P70298 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 Gm38089-201ENSMUST00000193585 1514 ntBASIC19.34■□□□□ 0.69
Cux2P70298 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 Gm18983-201ENSMUST00000222884 2729 ntBASIC19.34■□□□□ 0.69
Cux2P70298 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC19.34■□□□□ 0.69
Cux2P70298 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC19.34■□□□□ 0.69
Cux2P70298 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC19.34■□□□□ 0.69
Cux2P70298 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Cux2P70298 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC19.34■□□□□ 0.69
Cux2P70298 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cux2P70298 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cux2P70298 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cux2P70298 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cux2P70298 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Cux2P70298 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cux2P70298 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC19.33■□□□□ 0.69
Cux2P70298 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC19.33■□□□□ 0.69
Cux2P70298 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cux2P70298 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cux2P70298 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cux2P70298 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cux2P70298 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cux2P70298 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cux2P70298 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cux2P70298 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cux2P70298 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.68
Cux2P70298 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC19.33■□□□□ 0.68
Cux2P70298 Gm11993-201ENSMUST00000121861 820 ntBASIC19.33■□□□□ 0.68
Cux2P70298 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC19.33■□□□□ 0.68
Cux2P70298 Gm9372-201ENSMUST00000168454 430 ntBASIC19.33■□□□□ 0.68
Cux2P70298 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC19.33■□□□□ 0.68
Cux2P70298 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC19.33■□□□□ 0.68
Cux2P70298 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Cux2P70298 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cux2P70298 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cux2P70298 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cux2P70298 Gm44942-201ENSMUST00000096093 2072 ntBASIC19.32■□□□□ 0.68
Cux2P70298 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cux2P70298 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC19.32■□□□□ 0.68
Cux2P70298 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cux2P70298 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC19.32■□□□□ 0.68
Cux2P70298 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cux2P70298 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cux2P70298 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms