Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm7584-201ENSMUST00000175829 940 ntBASIC10.08□□□□□ -0.8
Pdlim4P70271 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Pdlim4P70271 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pdlim4P70271 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pdlim4P70271 Gm42937-201ENSMUST00000197360 752 ntBASIC10.08□□□□□ -0.8
Pdlim4P70271 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pdlim4P70271 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.08□□□□□ -0.8
Pdlim4P70271 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.08□□□□□ -0.8
Pdlim4P70271 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pdlim4P70271 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pdlim4P70271 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pdlim4P70271 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.08□□□□□ -0.8
Pdlim4P70271 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pdlim4P70271 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pdlim4P70271 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pdlim4P70271 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pdlim4P70271 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pdlim4P70271 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pdlim4P70271 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pdlim4P70271 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.08□□□□□ -0.8
Pdlim4P70271 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pdlim4P70271 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pdlim4P70271 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pdlim4P70271 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pdlim4P70271 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pdlim4P70271 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pdlim4P70271 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pdlim4P70271 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.07□□□□□ -0.8
Pdlim4P70271 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Pdlim4P70271 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Pdlim4P70271 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.07□□□□□ -0.8
Pdlim4P70271 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Pdlim4P70271 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.07□□□□□ -0.8
Pdlim4P70271 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.07□□□□□ -0.8
Pdlim4P70271 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.07□□□□□ -0.8
Pdlim4P70271 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Pdlim4P70271 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Pdlim4P70271 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Mir6420-201ENSMUST00000185032 102 ntBASIC10.07□□□□□ -0.8
Pdlim4P70271 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Gm8712-201ENSMUST00000221090 701 ntBASIC10.07□□□□□ -0.8
Pdlim4P70271 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.07□□□□□ -0.8
Pdlim4P70271 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Pdlim4P70271 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.07□□□□□ -0.8
Pdlim4P70271 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.07□□□□□ -0.8
Pdlim4P70271 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Pdlim4P70271 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.07□□□□□ -0.8
Pdlim4P70271 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdlim4P70271 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.06□□□□□ -0.8
Pdlim4P70271 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Pdlim4P70271 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.06□□□□□ -0.8
Pdlim4P70271 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms