Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Six5P70178 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Six5P70178 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Six5P70178 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Six5P70178 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.3□□□□□ -0.6
Six5P70178 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Six5P70178 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Six5P70178 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.3□□□□□ -0.6
Six5P70178 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.3□□□□□ -0.6
Six5P70178 Gm13350-201ENSMUST00000120519 479 ntBASIC11.3□□□□□ -0.6
Six5P70178 Gm15610-201ENSMUST00000120584 195 ntBASIC11.3□□□□□ -0.6
Six5P70178 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Six5P70178 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.3□□□□□ -0.6
Six5P70178 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.3□□□□□ -0.6
Six5P70178 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.3□□□□□ -0.6
Six5P70178 Gm44651-201ENSMUST00000207343 372 ntBASIC11.3□□□□□ -0.6
Six5P70178 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.3□□□□□ -0.6
Six5P70178 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.3□□□□□ -0.6
Six5P70178 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.3□□□□□ -0.6
Six5P70178 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.3□□□□□ -0.6
Six5P70178 Gzmn-202ENSMUST00000225535 989 ntBASIC11.3□□□□□ -0.6
Six5P70178 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Six5P70178 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Six5P70178 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Six5P70178 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Six5P70178 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Six5P70178 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Six5P70178 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Six5P70178 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Six5P70178 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Six5P70178 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.3□□□□□ -0.6
Six5P70178 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Six5P70178 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Six5P70178 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.3□□□□□ -0.6
Six5P70178 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Six5P70178 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Six5P70178 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Six5P70178 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Six5P70178 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Six5P70178 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.29□□□□□ -0.6
Six5P70178 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Six5P70178 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Six5P70178 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Six5P70178 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Six5P70178 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Six5P70178 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Six5P70178 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Six5P70178 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.29□□□□□ -0.6
Six5P70178 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Six5P70178 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.29□□□□□ -0.6
Six5P70178 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.29□□□□□ -0.6
Six5P70178 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.29□□□□□ -0.6
Six5P70178 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.29□□□□□ -0.6
Six5P70178 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Six5P70178 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Six5P70178 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Six5P70178 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Six5P70178 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Six5P70178 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Six5P70178 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Six5P70178 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Six5P70178 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Six5P70178 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Six5P70178 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Six5P70178 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Six5P70178 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Six5P70178 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Six5P70178 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.28□□□□□ -0.6
Six5P70178 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.28□□□□□ -0.6
Six5P70178 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Six5P70178 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Six5P70178 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.28□□□□□ -0.6
Six5P70178 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.28□□□□□ -0.6
Six5P70178 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.28□□□□□ -0.6
Six5P70178 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.28□□□□□ -0.6
Six5P70178 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Six5P70178 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Gm13296-201ENSMUST00000117854 997 ntBASIC11.28□□□□□ -0.6
Six5P70178 Gm5419-201ENSMUST00000119301 527 ntBASIC11.28□□□□□ -0.6
Six5P70178 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.28□□□□□ -0.6
Six5P70178 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Gm25890-201ENSMUST00000177643 165 ntBASIC11.28□□□□□ -0.6
Six5P70178 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.28□□□□□ -0.6
Six5P70178 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.28□□□□□ -0.6
Six5P70178 Gm22614-201ENSMUST00000178300 165 ntBASIC11.28□□□□□ -0.6
Six5P70178 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.28□□□□□ -0.6
Six5P70178 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.28□□□□□ -0.6
Six5P70178 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Six5P70178 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Six5P70178 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms