Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.36□□□□□ -0.43
Ybx1P62960 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ybx1P62960 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ybx1P62960 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ybx1P62960 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ybx1P62960 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.36□□□□□ -0.43
Ybx1P62960 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ybx1P62960 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ybx1P62960 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ybx1P62960 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ybx1P62960 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ybx1P62960 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ybx1P62960 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ybx1P62960 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ybx1P62960 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.36□□□□□ -0.43
Ybx1P62960 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Ybx1P62960 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ybx1P62960 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.36□□□□□ -0.43
Ybx1P62960 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ybx1P62960 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ybx1P62960 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.36□□□□□ -0.43
Ybx1P62960 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ybx1P62960 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ybx1P62960 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.35□□□□□ -0.43
Ybx1P62960 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Ybx1P62960 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Gm14247-201ENSMUST00000120950 237 ntBASIC12.35□□□□□ -0.43
Ybx1P62960 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
Ybx1P62960 Mir8115-201ENSMUST00000184992 119 ntBASIC12.35□□□□□ -0.43
Ybx1P62960 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.35□□□□□ -0.43
Ybx1P62960 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.35□□□□□ -0.43
Ybx1P62960 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.35□□□□□ -0.43
Ybx1P62960 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ybx1P62960 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.35□□□□□ -0.43
Ybx1P62960 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.35□□□□□ -0.43
Ybx1P62960 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ybx1P62960 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ybx1P62960 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ybx1P62960 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.34□□□□□ -0.43
Ybx1P62960 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ybx1P62960 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.34□□□□□ -0.43
Ybx1P62960 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ybx1P62960 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ybx1P62960 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ybx1P62960 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ybx1P62960 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ybx1P62960 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.34□□□□□ -0.43
Ybx1P62960 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Ybx1P62960 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.34□□□□□ -0.43
Ybx1P62960 Gm23912-201ENSMUST00000104687 87 ntBASIC12.34□□□□□ -0.43
Ybx1P62960 Gm5419-201ENSMUST00000119301 527 ntBASIC12.34□□□□□ -0.43
Ybx1P62960 Gm14585-201ENSMUST00000120713 634 ntBASIC12.34□□□□□ -0.43
Ybx1P62960 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ybx1P62960 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.34□□□□□ -0.43
Ybx1P62960 Gm7666-201ENSMUST00000146631 819 ntBASIC12.34□□□□□ -0.43
Ybx1P62960 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.34□□□□□ -0.43
Ybx1P62960 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.34□□□□□ -0.43
Ybx1P62960 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Ybx1P62960 Gm10731-201ENSMUST00000181171 448 ntBASIC12.34□□□□□ -0.43
Ybx1P62960 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.34□□□□□ -0.43
Ybx1P62960 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.34□□□□□ -0.43
Ybx1P62960 Gm43058-201ENSMUST00000197645 625 ntBASIC12.34□□□□□ -0.43
Ybx1P62960 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.34□□□□□ -0.43
Ybx1P62960 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.34□□□□□ -0.43
Ybx1P62960 Gm2517-201ENSMUST00000215651 348 ntBASIC12.34□□□□□ -0.43
Ybx1P62960 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.34□□□□□ -0.43
Ybx1P62960 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ybx1P62960 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ybx1P62960 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.34□□□□□ -0.43
Ybx1P62960 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ybx1P62960 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Ybx1P62960 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ybx1P62960 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms